2024/03/26 更新

写真a

ツシマ アヤコ
津島 綾子
TSUSHIMA AYAKO
担当
大学院農学研究科 応用生物科学専攻 助教
農学部 応用生物科学科
職名
助教
所属
農学研究院
連絡先
メールアドレス

担当・職階

  • 大学院農学研究科 応用生物科学専攻 

    助教  2022年04月 - 継続中

  • 農学部 応用生物科学科 

    助教  2022年04月 - 継続中

取得学位

  • 博士(理学) ( 東京大学 )

研究分野

  • 環境・農学 / 植物保護科学

  • ライフサイエンス / ゲノム生物学

受賞歴

  • 2023 IS-MPMI Shimamoto Travel Award

    2023年07月   The International Society for Molecular Plant-Microbe Interactions  

  • 平成28年度日本植物病理学会大会 学生優秀発表賞

    2016年05月  

  • 平成27年度植物感染生理談話会 優秀発表賞

    2015年08月  

職務経歴(学外)

  • 大阪公立大学

    2022年04月 - 継続中

  • ジョンイネスセンター   博士研究員

    2020年01月 - 2022年03月

  • 理化学研究所   特別研究員

    2019年07月 - 2019年12月

論文

  • Guanosine‐specific single‐stranded ribonuclease effectors of a phytopathogenic fungus potentiate host immune responses

    Naoyoshi Kumakura, Suthitar Singkaravanit‐Ogawa, Pamela Gan, Ayako Tsushima, Nobuaki Ishihama, Shunsuke Watanabe, Mitsunori Seo, Shintaro Iwasaki, Mari Narusaka, Yoshihiro Narusaka, Yoshitaka Takano, Ken Shirasu

    New Phytologist   2024年02月( ISSN:0028-646X

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    掲載種別:研究論文(学術雑誌)  

    Summary

    Plants activate immunity upon recognition of pathogen‐associated molecular patterns. Although phytopathogens have evolved a set of effector proteins to counteract plant immunity, some effectors are perceived by hosts and induce immune responses.

    Here, we show that two secreted ribonuclease effectors, SRN1 and SRN2, encoded in a phytopathogenic fungus, Colletotrichum orbiculare, induce cell death in a signal peptide‐ and catalytic residue‐dependent manner, when transiently expressed in Nicotiana benthamiana. The pervasive presence of SRN genes across Colletotrichum species suggested the conserved roles.

    Using a transient gene expression system in cucumber (Cucumis sativus), an original host of C. orbiculare, we show that SRN1 and SRN2 potentiate host pattern‐triggered immunity responses. Consistent with this, C. orbiculare SRN1 and SRN2 deletion mutants exhibited increased virulence on the host. In vitro analysis revealed that SRN1 specifically cleaves single‐stranded RNAs at guanosine, leaving a 3′‐end phosphate. Importantly, the potentiation of C. sativus responses by SRN1 and SRN2, present in the apoplast, depends on ribonuclease catalytic residues.

    We propose that the pathogen‐derived apoplastic guanosine‐specific single‐stranded endoribonucleases lead to immunity potentiation in plants.

    DOI: 10.1111/nph.19582

    その他URL: https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.19582

  • Genomic resources of Colletotrichum fungi: development and application

    Ayako Tsushima, Ken Shirasu

    Journal of General Plant Pathology   2022年10月( ISSN:1345-2630

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    掲載種別:研究論文(学術雑誌)  

    Abstract

    Anthracnose caused by Colletotrichum spp. is an economically important disease of many plants, including grain, vegetable, and fruit crops. Next-generation sequencing technologies have led to a dramatic growth in the size and availability of genomic data in public repositories. Beginning with genome sequencing projects of C. higginsianum and C. graminicola, many Colletotrichum spp. genomes have been sequenced due to their scientific and agricultural importance. Today, we can access more than a hundred genome assemblies of Colletotrichum spp. Utilizing those abundant genomic datasets would enable a better understanding of adaptation mechanisms of Colletotrichum spp. at the genomic level, which could help to control this important group of pathogens. In this review, we outline the development and application of genomic resources of Colletotrichum spp. with a focus on the benefits of genomic data-driven studies, including reverse-genetics, a range of comparative genomic analyses, species identification, taxonomy, and diagnosis, while describing the potential pitfalls of genome analysis. Further, we discuss future research directions that could allow a more comprehensive understanding of genomic diversity within the genus Colletotrichum.

    DOI: 10.1007/s10327-022-01097-y

    その他URL: https://link.springer.com/article/10.1007/s10327-022-01097-y/fulltext.html

  • Wheat stem rust recorded for the first time in decades in Ireland

    Ayako Tsushima, Clare M. Lewis, Kerstin Flath, Stephen Kildea, Diane G.O. Saunders

    Plant Pathology   2022年01月( ISSN:0032-0862

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    掲載種別:研究論文(学術雑誌)  

    DOI: 10.1111/ppa.13532

  • The Conserved Colletotrichum spp. Effector Candidate CEC3 Induces Nuclear Expansion and Cell Death in Plants

    Ayako Tsushima, Mari Narusaka, Pamela Gan, Naoyoshi Kumakura, Ryoko Hiroyama, Naoki Kato, Shunji Takahashi, Yoshitaka Takano, Yoshihiro Narusaka, Ken Shirasu

    Frontiers in Microbiology   12   682155 - 682155   2021年09月( ISSN:1664-302X

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    掲載種別:研究論文(学術雑誌)   国際・国内誌:国際誌  

    <jats:p>Plant pathogens secrete proteins, known as effectors, that promote infection by manipulating host cells. Members of the phytopathogenic fungal genus <jats:italic>Colletotrichum</jats:italic> collectively have a broad host range and generally adopt a hemibiotrophic lifestyle that includes an initial biotrophic phase and a later necrotrophic phase. We hypothesized that <jats:italic>Colletotrichum</jats:italic> fungi use a set of conserved effectors during infection to support the two phases of their hemibiotrophic lifestyle. This study aimed to examine this hypothesis by identifying and characterizing conserved effectors among <jats:italic>Colletotrichum</jats:italic> fungi. Comparative genomic analyses using genomes of ascomycete fungi with different lifestyles identified seven effector candidates that are conserved across the genus <jats:italic>Colletotrichum</jats:italic>. Transient expression assays showed that one of these putative conserved effectors, CEC3, induces nuclear expansion and cell death in <jats:italic>Nicotiana benthamiana</jats:italic>, suggesting that CEC3 is involved in promoting host cell death during infection. Nuclear expansion and cell death induction were commonly observed in CEC3 homologs from four different <jats:italic>Colletotrichum</jats:italic> species that vary in host specificity. Thus, CEC3 proteins could represent a novel class of core effectors with functional conservation in the genus C<jats:italic>olletotrichum</jats:italic>.</jats:p>

    DOI: 10.3389/fmicb.2021.682155

    PubMed

  • A pair of effectors encoded on a conditionally dispensable chromosome of Fusarium oxysporum suppress host-specific immunity

    Yu Ayukawa, Shuta Asai, Pamela Gan, Ayako Tsushima, Yasunori Ichihashi, Arisa Shibata, Ken Komatsu, Petra M. Houterman, Martijn Rep, Ken Shirasu, Tsutomu Arie

    Communications Biology   4 ( 1 )   707 - 707   2021年06月( ISSN:2399-3642

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    掲載種別:研究論文(学術雑誌)   国際・国内誌:国際誌  

    <jats:title>Abstract</jats:title><jats:p>Many plant pathogenic fungi contain conditionally dispensable (CD) chromosomes that are associated with virulence, but not growth in vitro. Virulence-associated CD chromosomes carry genes encoding effectors and/or host-specific toxin biosynthesis enzymes that may contribute to determining host specificity. <jats:italic>Fusarium oxysporum</jats:italic> causes devastating diseases of more than 100 plant species. Among a large number of host-specific forms, <jats:italic>F. oxysporum</jats:italic> f. sp. <jats:italic>conglutinans</jats:italic> (<jats:italic>Focn</jats:italic>) can infect Brassicaceae plants including Arabidopsis (<jats:italic>Arabidopsis thaliana</jats:italic>) and cabbage. Here we show that <jats:italic>Focn</jats:italic> has multiple CD chromosomes. We identified specific CD chromosomes that are required for virulence on Arabidopsis, cabbage, or both, and describe a pair of effectors encoded on one of the CD chromosomes that is required for suppression of Arabidopsis-specific phytoalexin-based immunity. The effector pair is highly conserved in <jats:italic>F. oxysporum</jats:italic> isolates capable of infecting Arabidopsis, but not of other plants. This study provides insight into how host specificity of <jats:italic>F. oxysporum</jats:italic> may be determined by a pair of effector genes on a transmissible CD chromosome.</jats:p>

    DOI: 10.1038/s42003-021-02245-4

    PubMed

  • Telomeres and a repeat‐rich chromosome encode effector gene clusters in plant pathogenicColletotrichumfungi

    Pamela Gan, Ryoko Hiroyama, Ayako Tsushima, Sachiko Masuda, Arisa Shibata, Akiko Ueno, Naoyoshi Kumakura, Mari Narusaka, Trinh Xuan Hoat, Yoshihiro Narusaka, Yoshitaka Takano, Ken Shirasu

    Environmental Microbiology   2021年04月( ISSN:1462-2912

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    掲載種別:研究論文(学術雑誌)  

    DOI: 10.1111/1462-2920.15490

    その他URL: https://onlinelibrary.wiley.com/doi/full-xml/10.1111/1462-2920.15490

  • Colletotrichum shisoi sp. nov., an anthracnose pathogen of Perilla frutescens in Japan: molecular phylogenetic, morphological and genomic evidence

    P. Gan, A. Tsushima, R. Hiroyama, M. Narusaka, Y. Takano, Y. Narusaka, M. Kawaradani, U. Damm, K. Shirasu

    Scientific Reports   9 ( 1 )   2019年12月( ISSN:2045-2322

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    掲載種別:研究論文(学術雑誌)  

    Abstract

    Species of the fungal genus Colletotrichum are among the most devastating pathogens of agricultural crops in the world. Based on DNA sequence data (ITS, GAPDH, CHS-1, ACT, TUB2) and morphology, we revealed Colletotrichum isolates infecting the oil crop Perilla frutescens, commonly known as shiso, to represent a previously unknown species of the C. destructivum species complex and described it as C. shisoi. We found that C. shisoi appears to be able to adopt a hemibiotrophic lifestyle, characterised by the formation of biotrophic hyphae followed by severe necrotic lesions on P. frutescens, but is less virulent on Arabidopsis, compared to its close relative C. higginsianum which also belongs to the C. destructivum species complex. The genome of C. shisoi was sequenced, annotated and its predicted proteome compared with four other Colletotrichum species. The predicted proteomes of C. shisoi and C. higginsianum, share many candidate effectors, which are small, secreted proteins that may contribute to infection. Interestingly, C. destructivum species complex-specific secreted proteins showed evidence of increased diversifying selection which may be related to their host specificities.

    DOI: 10.1038/s41598-019-50076-5

    その他URL: http://www.nature.com/articles/s41598-019-50076-5

  • Genome Sequence Resources for Four Phytopathogenic Fungi from the <i>Colletotrichum orbiculare</i> Species Complex

    P. Gan, A. Tsushima, M. Narusaka, Y. Narusaka, Y. Takano, Y. Kubo, K. Shirasu

    Molecular Plant-Microbe Interactions®   32 ( 9 )   1088 - 1090   2019年09月( ISSN:0894-0282

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    掲載種別:研究論文(学術雑誌)  

    Colletotrichum orbiculare species complex fungi are hemibiotrophic plant pathogens that cause anthracnose of field crops and weeds. Members of this group have genomes that are remarkably expanded relative to other Colletotrichum fungi and compartmentalized into AT-rich, gene-poor and GC-rich, gene-rich regions. Here, we present an updated version of the C. orbiculare genome, as well as draft genomes of three other members from the C. orbiculare species complex: the alfalfa pathogen C. trifolii, the prickly mallow pathogen C. sidae, and the burweed pathogen C. spinosum. The data reported here will be important for comparative genomics analyses to identify factors that play a role in the evolution and maintenance of the expanded, compartmentalized genomes of these fungi, which may contribute to their pathogenicity.

    DOI: 10.1094/mpmi-12-18-0352-a

  • Genomic Plasticity Mediated by Transposable Elements in the Plant Pathogenic Fungus Colletotrichum higginsianum

    Ayako Tsushima, Pamela Gan, Naoyoshi Kumakura, Mari Narusaka, Yoshitaka Takano, Yoshihiro Narusaka, Ken Shirasu

    Genome Biology and Evolution   11 ( 5 )   1487 - 1500   2019年05月( ISSN:1759-6653

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    掲載種別:研究論文(学術雑誌)  

    DOI: 10.1093/gbe/evz087

    その他URL: http://academic.oup.com/gbe/article-pdf/11/5/1487/28705793/evz087.pdf

  • Method for Assessing Virulence of Colletotrichum higginsianum on Arabidopsis thaliana Leaves Using Automated Lesion Area Detection and Measurement

    Ayako Tsushima, Pamela Gan, Ken Shirasu

    BIO-PROTOCOL   9 ( 22 )   2019年( ISSN:2331-8325

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    掲載種別:研究論文(学術雑誌)  

    DOI: 10.21769/bioprotoc.3434

  • Draft Genome Assembly of <i>Colletotrichum chlorophyti</i> , a Pathogen of Herbaceous Plants

    P. Gan, M. Narusaka, A. Tsushima, Y. Narusaka, Y. Takano, K. Shirasu

    Genome Announcements   5 ( 10 )   2017年03月

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    掲載種別:研究論文(学術雑誌)  

    ABSTRACT

    Colletotrichum chlorophyti is a fungal pathogen that infects various herbaceous plants, including crops such as legumes, tomato, and soybean. Here, we present the genome of C. chlorophyti NTL11, isolated from tomato. Analysis of this genome will allow a clearer understanding of the molecular mechanisms underlying fungal host range and pathogenicity.

    DOI: 10.1128/genomea.01733-16

  • Genus-Wide Comparative Genome Analyses of<i>Colletotrichum</i>Species Reveal Specific Gene Family Losses and Gains during Adaptation to Specific Infection Lifestyles

    Pamela Gan, Mari Narusaka, Naoyoshi Kumakura, Ayako Tsushima, Yoshitaka Takano, Yoshihiro Narusaka, Ken Shirasu

    Genome Biology and Evolution   8 ( 5 )   1467 - 1481   2016年05月

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    掲載種別:研究論文(学術雑誌)  

    DOI: 10.1093/gbe/evw089

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講演・口頭発表等

  • Constitutive expression of a phytopathogenic ascomycete-associated gene tends to suppress infection of Colletotrichum higginsianum 国内会議

    Ryushin Yamaguchi, Arisa Kuramoto, Koh Aoki, Ayako Tsushima

    日本植物生理学会第65回年会  2024年03月 

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    会議種別:口頭発表(一般)  

  • 露地栽培のブドウに感染しているブドウべと病菌の効率的なRNA抽出法の開発 国内会議

    木田千紗子, 塩崎修志, 青木 考, 津島綾子

    令和6年度日本植物病理学会大会  2024年03月 

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    会議種別:口頭発表(一般)  

  • ウリ類炭疽病菌の分泌性リボヌクレアーゼは宿主植物の免疫反応を増強する 国内会議

    熊倉直祐, Suthitar Singkaravanit-Ogawa, Pamela Gan, 津島綾子, 石濱伸明, 渡邊俊介, 瀬尾光範, 岩崎信太郎, 鳴坂真理, 鳴坂義弘, 髙野義孝, 白須 賢

    令和6年度日本植物病理学会大会  2024年03月 

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    会議種別:口頭発表(一般)  

  • 植物病原子嚢菌に保存されたSB2遺伝子を過剰発現するColletotrichum higginsianumの病原性は低下傾向を示す 国内会議

    山口龍真, 藏本亞理紗, 青木 考, 津島綾子

    令和6年度日本植物病理学会大会  2024年03月 

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    会議種別:口頭発表(一般)  

  • 野外植物に感染した植物病原菌の高効率 RNA 抽出法の開発 国内会議

    津島綾子

    第19回 けいはんな地区植物科学懇談会  2023年12月 

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    会議種別:口頭発表(一般)  

  • 野外トランスクリプトームデータを利用した植物病原体の診断と発生調査 招待 国内会議

    津島綾子

    令和5年度植物感染生理談話会  2023年09月 

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    会議種別:口頭発表(招待・特別)  

  • 野外トランスクリプトームデータを利用した植物病原体の診断と発生調査 招待 国内会議

    津島綾子

    2023 年度 滋賀植物病理懇話会  2023年09月 

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    会議種別:公開講演,セミナー,チュートリアル,講習,講義等  

  • Identifying genetic determinants for virulence in the wheat leaf rust pathogen using k-mer GWAS analysis 国際共著 国際会議

    Ayako Tsushima, Amelia Hubbard, Grzegorz Czajowski, Paweł Czembor, Diane G.O. Saunders

    2023 IS-MPMI Congress  2023年07月 

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    会議種別:ポスター発表  

  • コムギ赤さび病菌の病原性決定因子同定に向けたk-mer GWAS解析 国際共著 国内会議

    津島綾子, Amelia Hubbard, Grzegorz Czajowski, Paweł Czembor, Diane G.O. Saunders

    令和5年度日本植物病理学会大会  2023年03月 

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    会議種別:口頭発表(一般)  

  • 野外トランスクリプトームデータを利用した新興・再興病原菌の発生調査 招待 国内会議

    津島綾子

    日本微生物生態学会 第35回大会  2022年11月 

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    会議種別:口頭発表(招待・特別)  

  • アイルランドで発生したコムギ黒さび病菌のトランスクリプトームデータを用いた系統解析 国際共著 国内会議

    津島綾子, Clare M. Lewis, Kerstin Flath, Stephen Kildea, Diane G.O. Saunders

    令和4年度日本植物病理学会大会  2022年03月 

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    会議種別:口頭発表(一般)  

  • 植物病原真菌のゲノム情報の取得と活用 招待 国内会議

    津島綾子

    第5回 植物病理を紡ぐ会  2022年03月 

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    会議種別:公開講演,セミナー,チュートリアル,講習,講義等  

  • 野外トランスクリプトームデータを利用したコムギ黒さび病の診断と発生調査 招待 国際共著 国内会議

    津島綾子, Clare M. Lewis, Kerstin Flath, Stephen Kildea, Diane G.O. Saunders

    第63回日本植物生理学会年会  2022年03月 

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    会議種別:口頭発表(招待・特別)  

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科研費

  • 真菌界における植物病原性獲得の分子基盤の解明

    研究活動スタート支援  2022年

担当授業科目

  • 植物バイオサイエンス卒業研究

    2023年度   集中講義   大学

  • 機能ゲノム科学

    2023年度   週間授業   大学

  • 生化学基礎実験

    2023年度   週間授業   大学

  • 植物バイオサイエンス演習

    2023年度   集中講義   大学

  • 植物科学英語

    2023年度   集中講義   大学

  • 基礎化学実験

    2023年度   週間授業   大学

  • 応用生物科学研究プレゼンテーション

    2023年度   集中講義   大学院

  • 植物バイオサイエンス演習

    2022年度   集中講義   大学

  • 基礎化学実験/必:農〈応生〉

    2022年度   週間授業   大学

  • 機能ゲノム科学

    2022年度   週間授業   大学

  • 植物バイオテクノロジー概論

    2022年度   週間授業   大学

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論文・研究指導集計

  • 2023年度

    卒業論文指導数:2名